Improving molecular cancer class discovery through sparse non-negative matrix factorization.
Accurate multiplex polony sequencing of an evolved bacterial genome.
Authors: Authors: Shendure J, Porreca GJ, Reppas NB, Lin X, McCutcheon JP, Rosenbaum AM, Wang MD, Zhang K, Mitra RD, Church GM.
Science
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Science
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A network of transcriptionally coordinated functional modules in Saccharomyces cerevisiae.
Genomes optimize reproduction: aging as a consequence of the developmental program.
Molecular weight assessment of proteins in total proteome profiles using 1D-PAGE and LC/MS/MS.
Authors: Authors: Ahmad QR, Nguyen DH, Wingerd MA, Church GM, Steffen MA.
Proteome Sci
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Proteome Sci
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Accommodation or prediction?
Discovering functional transcription-factor combinations in the human cell cycle.
Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset.
Authors: Authors: Choe SE, Boutros M, Michelson AM, Church GM, Halfon MS.
Genome Biol
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Genome Biol
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Assessing computational tools for the discovery of transcription factor binding sites.
Authors: Authors: Tompa M, Li N, Bailey TL, Church GM, De Moor B, Eskin E, Favorov AV, Frith MC, Fu Y, Kent WJ, Makeev VJ, Mironov AA, Noble WS, Pavesi G, Pesole G, Régnier M, Simonis N, Sinha S, Thijs G, van Helden J, Vandenbogaert M, Weng Z, Workman C, Ye C, Zhu Z.
Nat Biotechnol
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Nat Biotechnol
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Modular epistasis in yeast metabolism.