In situ localized amplification and contact replication of many individual DNA molecules.
Systematic determination of genetic network architecture.
Authors: Authors: Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM.
Nat Genet
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Nat Genet
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Quantifying DNA-protein interactions by double-stranded DNA arrays.
Authors: Authors: Bulyk ML, Gentalen E, Lockhart DJ, Church GM.
Nat Biotechnol
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Nat Biotechnol
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Alignment and structure prediction of divergent protein families: periplasmic and outer membrane proteins of bacterial efflux pumps.
A weight matrix for binding recognition by the redox-response regulator ArcA-P of Escherichia coli.
Authors: Authors: McGuire AM, De Wulf P, Church GM, Lin EC.
Mol Microbiol
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Mol Microbiol
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Modeling gene expression with differential equations.
A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome.
Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation.
Authors: Authors: Roth FP, Hughes JD, Estep PW, Church GM.
Nat Biotechnol
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Nat Biotechnol
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Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli.
Methods for generating precise deletions and insertions in the genome of wild-type Escherichia coli: application to open reading frame characterization.