Designing genome editing experiments with EditABLE.
Authors: Authors: Maxim DS, Sostena J, Johnson NS, Wu DW, Charu V, Carter JN, Anand S, Church GM, Bhalla V.
Genome Biol
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Genome Biol
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Synthetic circuits for cell ratio control.
Authors: Authors: An B, Tang TC, Zhang Q, Wang T, Wang Y, Gan K, Liu K, Zhang DL, Liu Y, Pan YK, Yu M, Shaw WM, Liang Q, Wang Y, Vaiana CA, Lou C, Voigt CA, Lu TK, Church GM, Zhong C.
Nature
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Nature
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Manufacturing-aware generative models enable petascale synthesis of designed DNA.
Authors: Authors: Weinstein EN, Gollub MG, Slabodkin A, Dobbs K, Cui XB, Gardner CL, Grant RJ, Gurung K, Bailey A, Amin AN, Church GM, Wood EB.
Nat Biotechnol
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Nat Biotechnol
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A Simple, Ultrastable, and Cost-Effective Oxygen-Scavenging System for Long-Term DNA-PAINT Imaging.
Nutrient requirements of organ-specific metastasis in breast cancer.
Authors: Authors: Abbott KL, Subudhi S, Ferreira R, Gültekin Y, Steinbuch SC, Munim MB, Ramesh DL, Honeder SE, Kumar AS, Wu M, Hansen JA, Shevzov-Zebrun A, Rashan EH, Eghbalian KM, Sivanand S, Barbeau AM, Riedmayr LM, Duquette M, Ali A, Henning N, Trojan SE, Waite M, Kunchok T, Nakano MA, Gourgue F, Ferraro GB, Do BT, Spanoudaki V, Sánchez-Rivera FJ, Jin X, Church GM, Jain RK, Vander Heiden MG.
Nature
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Nature
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Engineered base editors with reduced bystander editing through directed evolution.
Authors: Authors: Perrotta RM, Vinke S, Ferreira R, Moret M, Mahas A, Chiappino-Pepe A, Riedmayr LM, Mehra AT, Lehmann LS, Church GM.
Nat Biotechnol
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Nat Biotechnol
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Plasmid2MC: efficient cell-free generation of high-purity minicircle DNA for genome editing in mammalian cells.
Authors: Authors: Oliynyk RT, Mahas A, Karpinski E, Church GM.
Commun Biol
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Commun Biol
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Standardized metrics for assessment and reproducibility of imaging-based spatial transcriptomics datasets.
Authors: Authors: Plummer JT, Dezem FS, Cook DP, Park J, Zhang L, Liu Y, Marção M, DuBose H, Wani A, Wise K, Roach M, Harvey K, Wang T, Jensen KB, Morosini N, De Gregorio R, Alonso A, Houlihan SL, Schwartz RE, Hissong E, Snopkowski C, Wrana JL, Ryan N, Butler LM, Church G, Swarbrick A, Mason CE, Martelotto LG.
Nat Biotechnol
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Nat Biotechnol
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The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs.
Authors: Authors: Park J, Gregorio R, Hissong E, Ozcelik E, Bartelo N, Dezem FS, Zhang L, Marção M, Chasteen H, Zheng Y, Abila E, Kim J, Nelson T, Proszynski J, Agyemang AA, Arikatla MR, Wani A, Liu Y, Metzger E, Rogers S, Divakar P, Dulai PS, Reeves J, Liang Y, Pan L, Bhattacharjee S, Patrick M, Young K, Heck A, Korukonda M, McGuire D, Wu L, Wardhani A, Beechem J, Church G, Lipkin SM, Berliner A, Patel S, Socciarelli F, Krumsiek J, Chandwani R, Monette S, Robinson B, Loda M, Elemento O, Martelotto L, Plummer J, Rendeiro AF, Alonso A, Schwartz RE, Houlihan SL, Mason CE.
bioRxiv
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bioRxiv
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Ovarian tumor cells gain competitive advantage by actively reducing the cellular fitness of microenvironment cells.
Authors: Authors: Madan E, Palma AM, Vudatha V, Kumar A, Bhoopathi P, Wilhelm J, Bernas T, Martin PC, Bilolikar G, Gogna A, Peixoto ML, Dreier I, Araujo TF, Garre E, Gustafsson A, Dorayappan KDP, Mamidi N, Sun Z, Yekelchyk M, Accardi D, Olsen AL, Lin L, Titelman AA, Bianchi M, Jessmon P, Farid EA, Pradhan AK, Neufeld L, Yeini E, Maji S, Pelham CJ, Kim H, Oh D, Rolfsnes HO, Marques RC, Lu A, Nagane M, Chaudhary S, Gupta K, Gogna KC, Bigio A, Bhoopathi K, Mannangatti P, Achary KG, Akhtar J, Belião S, Das S, Correia I, da Silva CL, Fialho AM, Poellmann MJ, Javius-Jones K, Hawkridge AM, Pal S, Shree KS, Rakha EA, Khurana S, Xiao G, Zhang D, Rijal A, Lyons C, Grossman SR, Turner DP, Pillappa R, Prakash K, Gupta G, Robinson GLWG, Koblinski J, Wang H, Singh G, Singh S, Rayamajhi S, Bacolod MD, Richards H, Sayeed S, Klein KP, Chelmow D, Satchi-Fainaro R, Selvendiran K, Connolly D, Thorsen FA, Bjerkvig R, Nephew KP, Idowu MO, Kühnel MP, Moskaluk C, Hong S, Redmond WL, Landberg G, Lopez-Beltran A, Poklepovic AS, Sanyal A, Fisher PB, Church GM, Menon U, Drapkin R, Godwin AK, Luo Y, Ackermann M, Tzankov A, Mertz KD, Jonigk D, Tsung A, Sidransky D, Trevino J, Saavedra AP, Winn R, Won KJ, Moreno E, Gogna R.
Nat Biotechnol
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Nat Biotechnol
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